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R-SIG-mixed-models June 2013

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Sunday, June 30, 2013 2 emails
Tom Wenseleers Question on mixed model design to analyze microarray data Seth Myers partial residuals or another method to check nonlinear model spec.? (emails keep bouncing)
Saturday, June 29, 2013 2 emails
Ben Bolker Question on mixed model design to analyze microarray data Tom Wenseleers Question on mixed model design to analyze microarray data
Friday, June 28, 2013 1 email
Ben Bolker Beware flying pigs
Thursday, June 27, 2013 11 emails
Ken Knoblauch Model validation for Presence / Absence (binomial) GLMs Ben Bolker Model validation for Presence / Absence (binomial) GLMs Chris Howden Model validation for Presence / Absence (binomial) GLMs Mark Payne Model validation for Presence / Absence (binomial) GLMs Hugh Sturrock Model validation for Presence / Absence (binomial) GLMs Mark Payne Model validation for Presence / Absence (binomial) GLMs Thomas Friedrichsmeier standard error of random effects variance tommy gaillard standard error of random effects variance Grace, Justin prediction and online learning Thomas Friedrichsmeier standard error of random effects variance tommy gaillard Assessing between-individual differences in both intercept and slope of variable factors
Wednesday, June 26, 2013 3 emails
Friso Muijsers LME - varComb and varIdent Friso Muijsers LME - varComb and varIdent James Grecian Comparing random effects with exactRLRT
Tuesday, June 25, 2013 3 emails
Henrik Singmann Bug in anova.mer with models in a list (CRAN lme4 and lme4.0 only) Brenda Chang nlme package nonlinear mixed model errors - fixed effects only espesser Multinomial Outcomes
Monday, June 24, 2013 9 emails
Andreas Karpf Multinomial Outcomes Baggett, Aaron Multinomial Outcomes Brenda Chang nlme package nonlinear mixed model error when fitting only fixed effects tommy gaillard standardized parameter estimates in random regression model Ben Bolker standardized parameter estimates in random regression model tommy gaillard standardized parameter estimates in random regression model Andreas Karpf MCMCglmm models stored as elements in a list Sven Hohenstein MCMCglmm models stored as elements in a list Frazer Sinclair MCMCglmm models stored as elements in a list
Sunday, June 23, 2013 2 emails
Jarrod Hadfield Parameter expansion with MCMCglmm Jarrod Hadfield Parameter expansion with MCMCglmm
Saturday, June 22, 2013 1 email
Highland Statistics Ltd making inferences about overdispersion in nbinom glmmabmb
Friday, June 21, 2013 2 emails
Joshua Wiley making inferences about overdispersion in nbinom glmmabmb Paul Johnson making inferences about overdispersion in nbinom glmmabmb
Thursday, June 20, 2013 1 email
Highland Statistics Ltd New book: Beginner's Guide to GLM and GLMM with R
Wednesday, June 19, 2013 4 emails
Joshua Wiley making inferences about overdispersion in nbinom glmmabmb Paul Johnson making inferences about overdispersion in nbinom glmmabmb Viechtbauer Wolfgang (STAT) Logistic Regression for Matched Case-Control Data Jaime Otero Villar Interpretation of random slope in gamm
Tuesday, June 18, 2013 6 emails
Nate Fronk Parameter expansion with MCMCglmm Douglas Bates varying intercept and varying slope models Douglas Bates varying intercept and varying slope models Ross Ahmed varying intercept and varying slope models Ben Bolker Logistic Regression for Matched Case-Control Data Viechtbauer Wolfgang (STAT) Logistic Regression for Matched Case-Control Data
Friday, June 14, 2013 1 email
Ken Knoblauch Psychometric curves with glmm
Thursday, June 13, 2013 5 emails
John.Morrongiello at csiro.au GAMM and GLMM for time to event data Bob Wiley conceptualizing items + subject analysis Donald Edward Frederick Psychometric curves with glmm Jake Westfall conceptualizing items + subject analysis Jonathan Baron conceptualizing items + subject analysis
Wednesday, June 12, 2013 4 emails
Ben Bolker MLWIN in R_errormessage_Error in read.dta(IGLSfile): unable to open file: 'No such file or directory' Andrew McFadden (Andy) MLWIN in R_error message_Error in read.dta(IGLSfile): unable to open file: 'No such file or directory' Ben Bolker Heteroscedasticity, lme4 and nlme Bob Wiley conceptualizing items + subject analysis
Tuesday, June 11, 2013 6 emails
Highland Statistics Ltd Confidence intervals in GAMM4 Jennifer Bufford Heteroscedasticity, lme4 and nlme Emmanuel Curis How to analyze a 2x2 crossover with baseline in R? Joshua Wiley Confidence intervals in GAMM4 Gavin Simpson Confidence intervals in GAMM4 Rodrigo Tardin Confidence intervals in GAMM4
Monday, June 10, 2013 1 email
Ben Bolker How to analyze a 2x2 crossover with baseline in R?
Saturday, June 8, 2013 1 email
Emmanuel Curis How to analyze a 2x2 crossover with baseline in R?
Friday, June 7, 2013 3 emails
Gavin Simpson TukeyHSD after lmer repeated measures Matthew Gifford MCMCglmm bivariate model - among individual covariance ONKELINX, Thierry Mixed Effects Model
Thursday, June 6, 2013 8 emails
stephen sefick TukeyHSD after lmer repeated measures Andrew Digby Autocorrelation in a GAMM for nightly time series Han-Gyol Yi Maximal specification of random effects stephen sefick Mixed Effects Model Geoff Brookshire Maximal specification of random effects Han-Gyol Yi Maximal specification of random effects Gavin Simpson Autocorrelation in a GAMM for nightly time series ONKELINX, Thierry Mixed Effects Model
Wednesday, June 5, 2013 7 emails
Andrew Digby Autocorrelation in a GAMM for nightly time series stephen sefick Mixed Effects Model Gavin Simpson Confidence intervals in GAMM4 Ben Bolker fitting glmer after using doFit=FALSE Jonas Klasen Application of coxme davidcostantini at libero.it Application of coxme Armenak ANTINYAN Question Regarding model Fit in lme4 package
Tuesday, June 4, 2013 26 emails
John Maindonald Negative Variance Ben Bolker Autocorrelation in a GAMM for nightly time series Ben Bolker nlme: varIdent Ben Bolker Negative Variance Samuel Bussmann fitting glmer after using doFit=FALSE Steve Candy issues with weights in glmer (or glmmADMB) [SEC=UNCLASSIFIED] John Maindonald Negative Variance Ryan King Negative Variance Malcolm Fairbrother Maximal specification of random effects laurent stephane Negative Variance laurent stephane Negative Variance Ben Bolker issues with weights in glmer (or glmmADMB) [SEC=UNCLASSIFIED] Ben Bolker Negative Variance Han-Gyol Yi Maximal specification of random effects D Gill nlme: varIdent Steven J. Pierce Mixed effects model with a distance matrix as a random effect Ben Bolker Negative Variance Callie Baird Negative Variance Jarrod Hadfield Negative Variance Douglas Bates Negative Variance Ben Bolker Negative Variance Ben Bolker issues with weights in glmer (or glmmADMB) [SEC=UNCLASSIFIED] Jonas Klasen Mixed effects model with a distance matrix as a random effect Callie Baird Negative Variance Roey Angel Mixed effects model with a distance matrix as a random effect Andrew Digby Autocorrelation in a GAMM for nightly time series
Monday, June 3, 2013 13 emails
Steve Candy issues with weights in glmer (or glmmADMB) [SEC=UNCLASSIFIED] Jarrod Hadfield MCMCglmm and estimated breeding values Jarrod Hadfield Multivariate Response Model in MCMCglmm - Estimating Posterior Correlation Between Traits Jarrod Hadfield MCMCglmm different random effects specifications Jarrod Hadfield MCMCglmm different random effects specifications Jarrod Hadfield MCMCglmm bivariate random regression Jarrod Hadfield MCMCglmm evaluates distributions differently for different orderings of (unordered) response variables Joshua Wiley issues with weights in glmer (or glmmADMB) Jarrod Hadfield MCMCglmm and left-censored data Samantha Patrick Piecewise regression/threshold models ONKELINX, Thierry three-levels of nesting in poisson mixed effect regression? ONKELINX, Thierry issues with weights in glmer (or glmmADMB) Anders Bjerring Strathe MCMCglmm and left-censored data
Sunday, June 2, 2013 2 emails
Joshua Wiley issues with weights in glmer (or glmmADMB) Christoph Terwitte MCMCglmm evaluates distributions differently for different orderings of (unordered) response variables
Saturday, June 1, 2013 4 emails
Ben Bolker LMER False Convergence (8) Rzhetsky, Andrey [BSD] - MED three-levels of nesting in poisson mixed effect regression? Rzhetsky, Andrey [BSD] - MED three-levels of nesting in poisson mixed effect regression? Daniel Anderson LMER False Convergence (8)